Compute a p value for the test of psi <= psi0 (lower = TRUE) or psi >= psi0 (lower = FALSE)
Source:R/xactonomial.R
pvalue_psi0.Rd
Compute a p value for the test of psi <= psi0 (lower = TRUE) or psi >= psi0 (lower = FALSE)
Usage
pvalue_psi0(
psi0,
psi,
psi_hat,
psi_obs,
maxit,
chunksize,
lower = TRUE,
target,
SSpacearr,
logC,
d_k
)
Arguments
- psi0
The null value
- psi
The function of interest
- psi_hat
The vector of psi values at each element of the sample space
- psi_obs
The observed estimate
- maxit
Maximum iterations
- chunksize
Chunk size
- lower
Do a one sided test of the null that it is less than psi0, otherwise greater.
- target
Stop the algorithm if p >= target (for speed)
- SSpacearr
The sample space array
- logC
The log multinomial coefficient
- d_k
The vector of dimensions