Package index
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TE()
- Treatment efficacy contrast functions
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add_bootstrap()
- Bootstrap resampling parameters
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add_estimate()
- Estimate parameters
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add_integration()
- Integration models
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add_riskmodel()
- Add risk model to a psdesign object
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calc_STG()
- Calculate the Standardized total gain
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calc_risk()
- Calculate the risk and functions of the risk
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empirical_TE()
- Compute the empirical Treatment Efficacy
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empirical_VE()
- Compute the empirical Treatment Efficacy
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expand_augdata()
- Expand augmented data using the integration function
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generate_example_data()
- Generate sample data used for testing
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integrate_bivnorm()
- Bivariate normal integration models for the missing S(1)
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integrate_nonparametric()
- Nonparametric integration model for the missing S(1)
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integrate_parametric()
- Parametric integration model for the missing S(1)
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integrate_semiparametric()
- Semiparametric integration model using the location-scale model
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plot(<psdesign>)
- Plot summary statistics for a psdesign object
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`+`(<ps>)
- Modify a psdesign object by adding on new components.
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print(<psdesign>)
- Concisely print information about a psdesign object
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ps_bootstrap()
- Estimate parameters from a specified model using bootstrap resampling and estimated maximum likelihood
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ps_estimate()
- Estimate parameters from a specified model using estimated maximum likelihood
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psdesign()
- Specify a design for a principal surrogate evaluation
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pseudo_score()
- Estimate parameters from a specified model using pseudo-score
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risk.logit()
- Logit link function
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risk.probit()
- Probit link function
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risk_binary()
- Risk model for binary outcome
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risk_continuous()
- Risk model for continuous outcome
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risk_exponential()
- Exponential risk model for time to event outcome
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risk_poisson()
- Poisson risk model for count outcomes
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risk_weibull()
- Weibull risk model for time to event outcome
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riskcalc()
- Calculate risks with handlers for survival data
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sp_locscale()
- Fit the semi-parametric location-scale model
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stg()
- Compute the standardized total gain
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summarize_bs()
- Summarize bootstrap samples
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summary(<psdesign>)
- Summary method for psdesign objects
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verify_trt()
- Check that a variable is suitable for using as binary treatment indicator
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wem_test()
- Test for wide effect modification